Preheat your oven to 350°F (175°C). Line a muffin tin with paper liners.
In a large bowl, whisk together the pumpkin puree, eggs, vegetable oil, granulated sugar, and brown sugar until smooth.
In another bowl, combine the baking powder, baking soda, salt, ground cinnamon, ground nutmeg, ground cloves, and flour.
Gradually add the dry ingredients to the wet ingredients, mixing until just combined. Do not overmix.
Fold in the chocolate chips.
Divide the batter evenly among the muffin cups, filling each about ⅔ full.
Bake for 20-25 minutes, or until a toothpick inserted into the center of a muffin comes out clean.
Allow the muffins to cool in the tin for 10 minutes, then transfer to a wire rack to cool completely.